Browsing Universitätsbibliographie by Author "Nalpas, Nicolas C."

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A TOR (target of rapamycin) and nutritional phosphoproteome of fission yeast reveals novel targets in networks conserved in humans

Halova, Lenka; Cobley, David; Franz-Wachtel, Mirita; Wang, Tingting; Morrison, Kaitlin R.; Krug, Karsten; Nalpas, Nicolas; Macek, Boris; Hagan, Iain M.; Humphrey, Sean J.; Petersen, Janni (2021)
An integrated workflow for enhanced taxonomic and functional coverage of the mouse fecal metaproteome

Nalpas, Nicolas; Hoyles, Lesley; Anselm, Viktoria; Ganief, Tariq; Martinez-Gili, Laura; Grau, Cristina; Droste-Borel, Irina; Davidovic, Laetitia; Altafaj, Xavier; Dumas, Marc-Emmanuel; Macek, Boris (2021)
APEX2-mediated proximity labeling resolves protein networks in Saccharomyces cerevisiae cells

Singer-Krueger, Birgit; Froehlich, Theresa; Franz-Wachtel, Mirita; Nalpas, Nicolas; Macek, Boris; Jansen, Ralf-Peter (2019)
beta-Actin mRNA interactome mapping by proximity biotinylation

Mukherjee, Joyita; Hermesh, Orit; Eliscovich, Carolina; Nalpas, Nicolas; Franz-Wachtel, Mirita; Macek, Boris; Jansen, Ralf-Peter (2019)
Circulating microRNAs as Potential Biomarkers of infectious Disease

Correia, Carolina N.; Nalpas, Nicolas C.; McLoughlin, Kirsten E.; Browne, John A.; Gordon, Stephen V.; MacHugh, David E.; Shaughnessy, Ronan G. (2017)
Comparative 'omics analyses differentiate Mycobacterium tuberculosis and Mycobacterium bovis and reveal distinct macrophage responses to infection with the human and bovine tubercle bacilli

Malone, Kerri M.; Rue-Albrecht, Kevin; Magee, David A.; Conlon, Kevin; Schubert, Olga T.; Nalpas, Nicolas C.; Browne, John A.; Smyth, Alicia; Gormley, Eamonn; Aebersold, Ruedi; MacHugh, David E.; Gordon, Stephen V. (2018)
Deep Proteogenomics of a Photosynthetic Cyanobacterium

Spaet, Philipp; Krauspe, Vanessa; Hess, Wolfgang R.; Macek, Boris; Nalpas, Nicolas (2023)
GOexpress: an R/Bioconductor package for the identification and visualisation of robust gene ontology signatures through supervised learning of gene expression data

Rue-Albrecht, Kevin; McGettigan, Paul A.; Hernandez, Belinda; Nalpas, Nicolas C.; Magee, David A.; Parnell, Andrew C.; Gordon, Stephen V.; MacHugh, David E. (2016)
In-depth analysis of Bacillus subtilis proteome identifies new ORFs and traces the evolutionary history of modified proteins

Ravikumar, Vaishnavi; Nalpas, Nicolas C.; Anselm, Viktoria; Krug, Karsten; Lenuzzi, Masa; Sestak, Martin Sebastijan; Domazet-Loso, Tomislav; Mijakovic, Ivan; Macek, Boris (2018)
Individualized Proteogenomics Reveals the Mutational Landscape of Melanoma Patients in Response to Immunotherapy

Schmitt, Marisa; Sinnberg, Tobias; Niessner, Heike; Forschner, Andrea; Garbe, Claus; Macek, Boris; Nalpas, Nicolas C. (2021)
Parallel reaction monitoring on a Q Exactive mass spectrometer increases reproducibility of phosphopeptide detection in bacterial phosphoproteomics measurements

Taumer, Christoph; Griesbaum, Lena; Kovacevic, Alen; Soufi, Boumediene; Nalpas, Nicolas C.; Macek, Boris (2018)
Phosphoproteome Dynamics of Streptomyces rimosus during Submerged Growth and Antibiotic Production

Saric, Ela; Quinn, Gerry A.; Nalpas, Nicolas; Paradzik, Tina; Kazazic, Sasa; Filic, Zelimira; Semanjski, Maja; Herron, Paul; Hunter, Iain; Macek, Boris; Vujaklija, Dusica (2022)
Proteome Dynamics during Antibiotic Persistence and Resuscitation

Semanjski, Maja; Gratani, Fabio Lino; Englert, Till; Nashier, Payal; Beke, Viktor; Nalpas, Nicolas; Germain, Elsa; George, Shilpa; Wolz, Christiane; Gerdes, Kenn; Macek, Boris (2021)
Proteome Response of a Metabolically Flexible Anoxygenic Phototroph to Fe(II) Oxidation

Bryce, Casey; Franz-Wachtel, Mirita; Nalpas, Nicolas C.; Miot, Jennyfer; Benzerara, Karim; Byrne, James M.; Kleindienst, Sara; Macek, Boris; Kappler, Andreas (2018)
Quantitative Proteomics Links the Intermediate Filament Nestin to Resistance to Targeted BRAF Inhibition in Melanoma Cells

Schmitt, Marisa; Sinnberg, Tobias; Nalpas, Nicolas C.; Maass, Annika; Schittek, Birgit; Macek, Boris (2019)
Recent progress in quantitative phosphoproteomics

Zittlau, Katharina; Nashier, Payal; Cavarischia-Rega, Claudia; Macek, Boris; Spaet, Philipp; Nalpas, Nicolas (2023)
RNA Sequencing (RNA-Seq) Reveals Extremely Low Levels of Reticulocyte-Derived Globin Gene Transcripts in Peripheral Blood From Horses (Equus caballus) and Cattle (Bos taurus)

Correia, Carolina N.; McLoughlin, Kirsten E.; Nalpas, Nicolas C.; Magee, David A.; Browne, John A.; Rue-Albrecht, Kevin; Gordon, Stephen, V; MacHugh, David E. (2018)
RNA-Seq Transcriptome Analysis of Peripheral Blood From Cattle Infected With Mycobacterium bovis Across an Experimental Time Course

McLoughlin, Kirsten E.; Correia, Carolina N.; Browne, John A.; Magee, David A.; Nalpas, Nicolas C.; Rue-Albrecht, Kevin; Whelan, Adam O.; Villarreal-Ramos, Bernardo; Vordermeier, H. Martin; Gormley, Eamonn; Gordon, Stephen, V; MacHugh, David E. (2021)
Temporal Analysis of Protein Ubiquitylation and Phosphorylation During Parkin-Dependent Mitophagy

Zittlau, Katharina I.; Lechado-Terradas, Anna; Nalpas, Nicolas; Geisler, Sven; Kahle, Philipp J.; Macek, Boris (2022)
The bovine alveolar macrophage DNA methylome is resilient to infection with Mycobacterium bovis

O'Doherty, Alan Mark; Rue-Albrecht, Kevin Christophe; Magee, David Andrew; Ahting, Simone; Irwin, Rachelle E. Lizabeth; Hall, Thomas Jonathan; Browne, John Arthur; Nalpas, Nicolas Claude; Walsh, Colum P. Atrick; Gordon, Stephen Vincent; Wojewodzic, Marcin Wlodzimierz; MacHugh, David Evan (2019)

Now showing items 1-20 of 20

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